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Crystal structure of a putative acetyltransferase (NP_394282.1) from thermoplasma acidophilum at 2.00 a resolution

Analyse Crystal structure of a putative acetyltransferase (NP_394282.1) from… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
3C26
Type
protein
Length
257 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Putative acetyltransferase TA0821
UniProt
Q9HJZ0
Ligands
NO3
Pockets
1 · best druggability 0.79

Structure

x-ray diffraction · 1 distinct chain · 31% helix, 39% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
APutative acetyltransferase TA0821protein25731% helix, 39% strandQ9HJZ0

Ligands and binding sites

  • NO3 · Nitrate ion · ion · 3 copies · chains A
  • EDO · 1,2-ethanediol · additive · 5 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
12570.790.9143NO3, EDO

Modifications

Observed in the structure: 7 modified, 1 disulfide (engineered, disulfide).

Compared structures

  • 3C26 · Crystal structure of a putative acetyltransferase (NP_394282.1) from Thermoplasma… · the same entry in another collection · chain A against A, TM-score 1.00

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