Research workbench
Crystal structure of uncharacterized protein CMQ451C from the primitive red alga cyanidioschyzon merolae
Analyse Crystal structure of uncharacterized protein CMQ451C from the primitive red… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3BZB
- Type
- protein
- Length
- 389 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Uncharacterized protein
- Pockets
- 3 · best druggability 0.47
Structure
x-ray diffraction · 2 distinct chains · 33% helix, 28% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Uncharacterized protein | protein | 189 | 33% helix, 27% strand | — |
| B | Uncharacterized protein | protein | 200 | 33% helix, 28% strand | — |
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 165 | 0.47 | 0.76 | 33 | empty |
| 2 | 138 | 0.44 | 0.76 | 26 | empty |
| 3 | 52 | 0.34 | 0.79 | 14 | empty |
Interfaces
1 interface between chains.
- A–B · 308 Ų buried · 5 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 3 modified (engineered).
Compared structures
- 3BZB · Crystal structure of uncharacterized protein CMQ451C from the primitive red alga… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 3BZB · PDBe 3BZB
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