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Crystal structure of a conserved protein of unknown function from pseudomonas syringae pv. tomato str. DC3000

Analyse Crystal structure of a conserved protein of unknown function from pseudomonas… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 3BZ6
Type: protein
Length: 168 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: UPF0502 protein PSPTO_2686
UniProt: Q882E2
Pockets: 1 · best druggability 0.33

Structure

x-ray diffraction · 1 distinct chain · 50% helix, 13% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	UPF0502 protein PSPTO_2686	protein	168	50% helix, 13% strand	Q882E2

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	63	0.33	0.77	20	empty

Modifications

Observed in the structure: 4 modified (engineered).

Compared structures

3BZ6 · Crystal structure of a conserved protein of unknown function from Pseudomonas syringae… · the same entry in another collection · chain A against A, TM-score 1.00
Q882E2 · AlphaFold monomer V2.0 prediction for UPF0502 protein PSPTO_2686 (Q882E2) · a predicted model of the same protein · chain A against A, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q882E2
Elsewhere: RCSB PDB 3BZ6 · PDBe 3BZ6 · UniProt Q882E2

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