Research workbench
Crystal structure of a glyoxalase-related enzyme from clostridium phytofermentans
Analyse Crystal structure of a glyoxalase-related enzyme from clostridium… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3BT3
- Type
- protein
- Length
- 258 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Glyoxalase-related enzyme, arac type
- UniProt
- Q1FJ26
- Pockets
- 4 · best druggability 0.45
Structure
x-ray diffraction · 1 distinct chain · 16% helix, 41% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Glyoxalase-related enzyme, arac type | protein | 129 | 16% helix, 41% strand | Q1FJ26 |
Pockets
4 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 153 | 0.45 | 0.75 | 26 | empty |
| 2 | 150 | 0.43 | 0.75 | 26 | empty |
| 3 | 64 | 0.40 | 0.80 | 16 | empty |
| 4 | 87 | 0.40 | 0.77 | 20 | empty |
Interfaces
1 interface between chains.
- A–B · 1758 Ų buried · 33 hydrogen bonds · protein-protein
Compared structures
- 3BT3 · Crystal structure of a glyoxalase-related enzyme from Clostridium phytofermentans · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q1FJ26
- Elsewhere: RCSB PDB 3BT3 · PDBe 3BT3 · UniProt Q1FJ26
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