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Crystal structure of marr family transcriptional regulator from silicibacter pomeroyi

Analyse Crystal structure of marr family transcriptional regulator from silicibacter… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 3BOQ
Type: protein
Length: 274 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Transcriptional regulator, marr family
UniProt: Q5LLB8
Pockets: 4 · best druggability 0.51

Structure

x-ray diffraction · 2 distinct chains · 73% helix, 5% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Transcriptional regulator, marr family	protein	136	74% helix, 7% strand	Q5LLB8
B	Transcriptional regulator, marr family	protein	138	72% helix, 4% strand	Q5LLB8

Pockets

4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	120	0.51	0.81	17	empty
2	110	0.51	0.82	18	empty
3	119	0.41	0.76	23	empty
4	51	0.24	0.73	12	empty

Interfaces

1 interface between chains.

A–B · 2505 Å² buried · 12 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 10 modified (engineered).

Compared structures

3BOQ · Crystal structure of MarR family transcriptional regulator from Silicibacter pomeroyi · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

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Every structure of UniProt Q5LLB8
Elsewhere: RCSB PDB 3BOQ · PDBe 3BOQ · UniProt Q5LLB8

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