Research workbench
Crystal structure of tetr-family transcriptional regulator from streptomyces coelicolor
Analyse Crystal structure of tetr-family transcriptional regulator from streptomyces… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3BNI
- Type
- protein
- Length
- 345 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Putative tetr-family transcriptional regulator
- UniProt
- Q8CK21
- Pockets
- 2 · best druggability 0.74
Structure
x-ray diffraction · 2 distinct chains · 77% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative tetr-family transcriptional regulator | protein | 174 | 77% helix, 0% strand | Q8CK21 |
| B | Putative tetr-family transcriptional regulator | protein | 171 | 77% helix, 0% strand | Q8CK21 |
Ligands and binding sites
- PG4 · Tetraethylene glycol · additive · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 189 | 0.74 | 0.90 | 29 | PG4 |
| 2 | 221 | 0.74 | 0.88 | 30 | PG4 |
Interfaces
1 interface between chains.
- A–B · 1102 Ų buried · 6 hydrogen bonds · protein-protein
Compared structures
- 3BNI · Crystal structure of TetR-family transcriptional regulator from Streptomyces coelicolor · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8CK21
- Elsewhere: RCSB PDB 3BNI · PDBe 3BNI · UniProt Q8CK21
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.