Research workbench
Structure of DNA octamer G(DUSE)G(5-SEDU)ACAC
Analyse Structure of DNA octamer G(DUSE)G(5-SEDU)ACAC in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3BM0
- Type
- DNA
- Length
- 8 nucleotides
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- 5'-D(*GP*(2'-se-U)P*GP*(5-se-U)P*AP*CP*AP*C)-3'
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 5'-D(*GP*(2'-se-U)P*GP*(5-se-U)P*AP*CP*AP*C)-3' | dna | 8 | — | — |
Modifications
Observed in the structure: 2 modified (nucleotide modification).
Compared structures
- 3BM0 · Structure of DNA Octamer G(dUSe)G(5-SedU)ACAC · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 3BM0 · PDBe 3BM0
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