Research workbench
Crystal structure of protein GSU0716 from geobacter sulfurreducens. northeast structural genomics target GSR13
Analyse Crystal structure of protein GSU0716 from geobacter sulfurreducens. northeast… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3BIJ
- Type
- protein
- Length
- 791 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Uncharacterized protein GSU0716
- UniProt
- Q74F93
- Pockets
- 8 · best druggability 0.85
Structure
x-ray diffraction · 3 distinct chains · 36% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Uncharacterized protein GSU0716 | protein | 265 | 35% helix, 22% strand | Q74F93 |
| B | Uncharacterized protein GSU0716 | protein | 262 | 37% helix, 23% strand | Q74F93 |
| C | Uncharacterized protein GSU0716 | protein | 264 | 36% helix, 22% strand | Q74F93 |
Pockets
8 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1190 | 0.85 | 0.86 | 122 | empty |
| 2 | 215 | 0.67 | 0.85 | 29 | empty |
| 3 | 391 | 0.60 | 0.76 | 48 | empty |
| 4 | 78 | 0.39 | 0.78 | 18 | empty |
| 5 | 53 | 0.37 | 0.80 | 15 | empty |
Interfaces
2 interfaces between chains.
- A–B · 1179 Ų buried · 19 hydrogen bonds · protein-protein
- B–C · 325 Ų buried · 1 hydrogen bond · protein-protein
Modifications
Observed in the structure: 21 modified (engineered).
Compared structures
- 3BIJ · Crystal structure of protein GSU0716 from Geobacter sulfurreducens. Northeast Structural… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q74F93
- Elsewhere: RCSB PDB 3BIJ · PDBe 3BIJ · UniProt Q74F93
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.