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MANNOSE/SORBOSE specific iia subunit of phosphotransferase system from enterococcus faecalis

Analyse MANNOSE/SORBOSE specific iia subunit of phosphotransferase system from… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 3BED
Type: protein
Length: 261 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Pts system, iia component
UniProt: Q838I6
Pockets: 1 · best druggability 0.50

Structure

x-ray diffraction · 2 distinct chains · 48% helix, 19% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Pts system, iia component	protein	132	46% helix, 19% strand	Q838I6
B	Pts system, iia component	protein	129	50% helix, 19% strand	Q838I6

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	63	0.50	0.85	25	empty

Interfaces

1 interface between chains.

A–B · 1637 Å² buried · 20 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 22 modified (engineered, methylation).

Compared structures

3BED · Mannose/sorbose specific IIA subunit of phosphotransferase system from Enterococcus… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q838I6
Elsewhere: RCSB PDB 3BED · PDBe 3BED · UniProt Q838I6

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