Research workbench
NMR observation of a novel C-tetrad
Analyse NMR observation of a novel C-tetrad in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1EVO
- Type
- DNA
- Length
- 32 nucleotides
- Chains
- 4
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- DNA (5'-D(*TP*GP*GP*GP*CP*GP*GP*T)-3')
Structure
solution nmr · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| O, P, Q, R | DNA (5'-D(*TP*GP*GP*GP*CP*GP*GP*T)-3') | dna | 8 | — | — |
Interfaces
6 interfaces between chains.
- O–Q · 430 Ų buried · 34 hydrogen bonds · nucleic-nucleic
- P–R · 421 Ų buried · 31 hydrogen bonds · nucleic-nucleic
- O–R · 420 Ų buried · 30 hydrogen bonds · nucleic-nucleic
- P–Q · 415 Ų buried · 29 hydrogen bonds · nucleic-nucleic
- O–P · 80 Ų buried · 0 hydrogen bonds · nucleic-nucleic
Compared structures
- 1EVO · NMR observation of a novel C-tetrad · the same entry in another collection · chain O against O, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 1EVO · PDBe 1EVO
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