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X-ray crystal structure of human ppar gamma with 2-(5-(3-(2-(5-methyl- 2-phenyloxazol-4-YL)ETHOXY)BENZYL)-2-phenyl-2H-1,2,3-triazol-4-yl) acetic acid

Analyse X-ray crystal structure of human ppar gamma with 2-(5-(3-(2-(5-methyl… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 3BC5
Type: protein
Length: 263 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Peroxisome proliferator-activated receptor gamma
UniProt: P37231
Ligands: ZAA
Pockets: 3 · best druggability 0.81

Structure

x-ray diffraction · 1 distinct chain · 65% helix, 5% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Peroxisome proliferator-activated receptor gamma	protein	263	65% helix, 5% strand	P37231

Ligands and binding sites

ZAA · (5-{3-[2-(5-methyl-2-phenyl-1,3-oxazol-4-yl)ethoxy]benzyl}-2-phenyl-2H-1,2,3-triazol-4-yl)acetic acid · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	502	0.81	0.87	55	ZAA
2	50	0.43	0.83	14	empty
3	51	0.31	0.77	11	empty

Compared structures

3BC5 · X-ray crystal structure of human ppar gamma with… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P37231
Elsewhere: RCSB PDB 3BC5 · PDBe 3BC5 · UniProt P37231

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