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Crystal structure of the E.COLI ferritin ecftna
Analyse Crystal structure of the E.COLI ferritin ecftna in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1EUM
- Type
- protein
- Length
- 966 residues
- Chains
- 6
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Ferritin 1
- UniProt
- P0A998
- Pockets
- 9 · best druggability 0.54
Structure
x-ray diffraction · 1 distinct chain · 80% helix, 1% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C, D, E, F | Ferritin 1 | protein | 161 | 80% helix, 1% strand | P0A998 |
Pockets
9 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 229 | 0.54 | 0.78 | 30 | empty |
| 2 | 212 | 0.52 | 0.77 | 27 | empty |
| 3 | 191 | 0.51 | 0.77 | 28 | empty |
| 4 | 111 | 0.49 | 0.80 | 20 | empty |
| 5 | 161 | 0.48 | 0.77 | 27 | empty |
Interfaces
8 interfaces between chains.
- B–E · 1194 Ų buried · 12 hydrogen bonds · protein-protein
- A–F · 1193 Ų buried · 10 hydrogen bonds · protein-protein
- C–D · 1188 Ų buried · 12 hydrogen bonds · protein-protein
- A–C · 494 Ų buried · 3 hydrogen bonds · protein-protein
- D–E · 458 Ų buried · 3 hydrogen bonds · protein-protein
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0A998
- Elsewhere: RCSB PDB 1EUM · PDBe 1EUM · UniProt P0A998
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