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High resolution crystal structure of C3PO

Analyse High resolution crystal structure of C3PO in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 3AXJ
Type: protein
Length: 465 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: GM27569P; Translin associated factor X, isoform B
UniProt: Q7JVK6, Q8INE1
Pockets: 5 · best druggability 0.57

Structure

x-ray diffraction · 2 distinct chains · 77% helix, 2% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	GM27569P	protein	225	78% helix, 1% strand	Q7JVK6
B	Translin associated factor X, isoform B	protein	240	75% helix, 3% strand	Q8INE1

Pockets

5 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	250	0.57	0.79	27	empty
2	296	0.57	0.77	33	empty
3	184	0.52	0.79	20	empty
4	63	0.36	0.79	12	empty
5	62	0.33	0.77	16	empty

Interfaces

1 interface between chains.

A–B · 2153 Å² buried · 23 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 8 modified (engineered).

Compared structures

3AXJ · High resolution crystal structure of C3PO · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q7JVK6
Every structure of UniProt Q8INE1
Elsewhere: RCSB PDB 3AXJ · PDBe 3AXJ · UniProt Q7JVK6 · UniProt Q8INE1

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