Research workbench
Rev response element (rre) RNA complexed with rev peptide, NMR, 19 structures
Analyse Rev response element (rre) RNA complexed with rev peptide, NMR, 19 structures in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1ETG
- Type
- protein + RNA
- Length
- 57 residues
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Rev responsive element RNA; Rev peptide
- UniProt
- P05866
- Pockets
- 1 · best druggability 0.33
Structure
solution nmr · 2 distinct chains · 87% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Rev responsive element RNA | rna | 34 | — | — |
| B | Rev peptide | protein | 23 | 87% helix, 0% strand | P05866 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 77 | 0.33 | 0.76 | 9 | empty |
Interfaces
1 interface between chains.
- A–B · 984 Ų buried · 35 hydrogen bonds · protein-nucleic
Compared structures
- 1ETG · Rev response element (rre) RNA complexed with rev peptide, NMR, 19 structures · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P05866
- Elsewhere: RCSB PDB 1ETG · PDBe 1ETG · UniProt P05866
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