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Crystal structure of cold shock protein 1 from thermus thermophilus HB8

Analyse Crystal structure of cold shock protein 1 from thermus thermophilus HB8 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 3A0J
Type: protein
Length: 146 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Cold shock protein
UniProt: Q5SLW8
Pockets: 1 · best druggability 0.48

Structure

x-ray diffraction · 1 distinct chain · 4% helix, 48% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	Cold shock protein	protein	73	4% helix, 48% strand	Q5SLW8

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	226	0.48	0.75	30	empty

Interfaces

1 interface between chains.

A–B · 425 Å² buried · 17 hydrogen bonds · protein-protein

Compared structures

3A0J · Crystal structure of cold shock protein 1 from Thermus thermophilus HB8 · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q5SLW8
Elsewhere: RCSB PDB 3A0J · PDBe 3A0J · UniProt Q5SLW8

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