Research workbench
Crystal structure analysis of the hev capsid protein, PORF2
Analyse Crystal structure analysis of the hev capsid protein, PORF2 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2ZZQ
- Type
- protein
- Length
- 483 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Protein ORF3, capsid protein
- UniProt
- P69616, P29326
- Pockets
- 2 · best druggability 0.72
Structure
x-ray diffraction · 1 distinct chain · 10% helix, 36% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein ORF3, capsid protein | protein | 483 | 10% helix, 36% strand | P69616, P29326 |
Pockets
2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 53 | 0.72 | 0.98 | 16 | empty |
| 2 | 217 | 0.57 | 0.79 | 35 | empty |
Compared structures
- 2ZZQ · Crystal structure analysis of the HEV capsid protein, PORF2 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P69616
- Every structure of UniProt P29326
- Elsewhere: RCSB PDB 2ZZQ · PDBe 2ZZQ · UniProt P69616 · UniProt P29326
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