Research workbench
Structure of the periplasmic domain of motb from salmonella (crystal form I)
Analyse Structure of the periplasmic domain of motb from salmonella (crystal form I) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2ZOV
- Type
- protein
- Length
- 166 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Chemotaxis protein motb
- UniProt
- P55892
- Pockets
- 2 · best druggability 0.35
Structure
x-ray diffraction · 1 distinct chain · 44% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Chemotaxis protein motb | protein | 166 | 44% helix, 23% strand | P55892 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 75 | 0.35 | 0.76 | 16 | empty |
| 2 | 62 | 0.34 | 0.78 | 17 | empty |
Modifications
Observed in the structure: 4 modified (engineered).
Compared structures
- 2ZOV · Structure of the periplasmic domain of MotB from Salmonella (crystal form I) · the same entry in another collection · chain A against A, TM-score 1.00
- P55892 · AlphaFold monomer V2.0 prediction for motility protein B (P55892) · a predicted model of the same protein · chain A against A, TM-score 0.96
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P55892
- Elsewhere: RCSB PDB 2ZOV · PDBe 2ZOV · UniProt P55892
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.