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NMR structures of yeast proteasome component RPN13

Analyse NMR structures of yeast proteasome component RPN13 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 2Z4D
Type: protein
Length: 96 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: 26S proteasome regulatory subunit RPN13
UniProt: O13563
Pockets: 1 · best druggability 0.40

Structure

solution nmr · 1 distinct chain · 0% helix, 40% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	26S proteasome regulatory subunit RPN13	protein	96	0% helix, 40% strand	O13563

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	79	0.40	0.77	16	empty

Compared structures

2Z4D · NMR Structures of Yeast Proteasome Component Rpn13 · the same entry in another collection · chain A against A, TM-score 1.00
O13563 · AlphaFold monomer V2.0 prediction for 26S proteasome regulatory subunit RPN13 (O13563) · a predicted model of the same protein · chain A against A, TM-score 0.69

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt O13563
Elsewhere: RCSB PDB 2Z4D · PDBe 2Z4D · UniProt O13563

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