Research workbench
Crystal structure of hypothetical protein PH0355
Analyse Crystal structure of hypothetical protein PH0355 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2Z0T
- Type
- protein
- Length
- 434 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Putative uncharacterized protein PH0355
- UniProt
- O58093
- Pockets
- 5 · best druggability 0.64
Structure
x-ray diffraction · 2 distinct chains · 39% helix, 29% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, C | Putative uncharacterized protein PH0355 | protein | 109 | 39% helix, 29% strand | O58093 |
| B, D | Putative uncharacterized protein PH0355 | protein | 108 | 40% helix, 30% strand | O58093 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 322 | 0.64 | 0.80 | 46 | empty |
| 2 | 397 | 0.64 | 0.78 | 62 | empty |
| 3 | 79 | 0.48 | 0.82 | 14 | empty |
| 4 | 145 | 0.47 | 0.77 | 21 | empty |
| 5 | 67 | 0.46 | 0.83 | 13 | empty |
Interfaces
5 interfaces between chains.
- A–B · 613 Ų buried · 4 hydrogen bonds · protein-protein
- C–D · 594 Ų buried · 6 hydrogen bonds · protein-protein
- B–C · 496 Ų buried · 9 hydrogen bonds · protein-protein
- A–C · 248 Ų buried · 4 hydrogen bonds · protein-protein
- B–D · 213 Ų buried · 3 hydrogen bonds · protein-protein
Compared structures
- 2Z0T · Crystal structure of hypothetical protein PH0355 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O58093
- Elsewhere: RCSB PDB 2Z0T · PDBe 2Z0T · UniProt O58093
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