Research workbench
Solution structure of PDZ domain of rho GTPase activating protein 21
Analyse Solution structure of PDZ domain of rho GTPase activating protein 21 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2YUY
- Type
- protein
- Length
- 126 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Rho GTPase activating protein 21
- UniProt
- Q5T5U3
- Pockets
- 2 · best druggability 0.42
Structure
solution nmr · 1 distinct chain · 11% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Rho GTPase activating protein 21 | protein | 126 | 11% helix, 12% strand | Q5T5U3 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 77 | 0.42 | 0.80 | 18 | empty |
| 2 | 56 | 0.30 | 0.75 | 11 | empty |
Compared structures
- 2YUY · Solution Structure of PDZ domain of Rho GTPase Activating Protein 21 · the same entry in another collection · chain A against A, TM-score 1.00
- Q5T5U3 · AlphaFold monomer V2.0 prediction for rho GTPase-activating protein 21 (Q5T5U3) · a predicted model of the same protein · chain A against A, TM-score 0.61
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5T5U3
- Elsewhere: RCSB PDB 2YUY · PDBe 2YUY · UniProt Q5T5U3
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.