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Crystal structure of putative short-chain oxidoreductase TTHB094 from thermus thermophilus HB8

Analyse Crystal structure of putative short-chain oxidoreductase TTHB094 from thermus… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 2YUT
Type: protein
Length: 202 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Putative short-chain oxidoreductase
UniProt: Q53W68
Ligands: NAP
Pockets: 1 · best druggability 0.78

Structure

x-ray diffraction · 1 distinct chain · 47% helix, 18% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Putative short-chain oxidoreductase	protein	202	47% helix, 18% strand	Q53W68

Ligands and binding sites

NAP · Nadp nicotinamide-adenine-dinucleotide phosphate · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	438	0.78	0.86	49	NAP

Modifications

Observed in the structure: 2 modified (engineered).

Compared structures

2YUT · Crystal Structure of Putative Short-Chain Oxidoreductase TTHB094 from Thermus… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q53W68
Elsewhere: RCSB PDB 2YUT · PDBe 2YUT · UniProt Q53W68

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