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Solution structure of the yth domain in yth domain-containing protein 2

Analyse Solution structure of the yth domain in yth domain-containing protein 2 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 2YU6
Type: protein
Length: 141 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Yth domain-containing protein 2
UniProt: Q9H6S0
Pockets: 1 · best druggability 0.41

Structure

solution nmr · 1 distinct chain · 23% helix, 29% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Yth domain-containing protein 2	protein	141	23% helix, 29% strand	Q9H6S0

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	84	0.41	0.79	15	empty

Compared structures

2YU6 · Solution structure of the YTH domain in YTH domain-containing protein 2 · the same entry in another collection · chain A against A, TM-score 1.00
Q9H6S0 · AlphaFold monomer V2.0 prediction for 3'-5' RNA helicase YTHDC2 (Q9H6S0) · a predicted model of the same protein · chain A against A, TM-score 0.92

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9H6S0
Elsewhere: RCSB PDB 2YU6 · PDBe 2YU6 · UniProt Q9H6S0

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