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Solution structure of the SH3_1 domain of yamaguchi sarcoma viral (V- yes) oncogene homolog 1

Analyse Solution structure of the SH3_1 domain of yamaguchi sarcoma viral (V- yes)… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 2YT6
Type: protein
Length: 109 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Adult male urinary bladder cdna, riken full-length enriched library, CLONE:9530076O17…
UniProt: Q8CBP1
Pockets: 1 · best druggability 0.50

Structure

solution nmr · 1 distinct chain · 5% helix, 20% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Adult male urinary bladder cdna, riken full-length enriched library, CLONE:9530076O17 PRODUCT:YAMAGUCHI sarcoma viral (V-yes) oncogene homolog	protein	109	5% helix, 20% strand	Q8CBP1

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	201	0.50	0.76	25	empty

Compared structures

2YT6 · Solution structure of the SH3_1 domain of Yamaguchi sarcoma viral (v-yes) oncogene… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q8CBP1
Elsewhere: RCSB PDB 2YT6 · PDBe 2YT6 · UniProt Q8CBP1

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