Research workbench
Crystal structure of TT2238, a four-helix bundle protein
Analyse Crystal structure of TT2238, a four-helix bundle protein in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2YQY
- Type
- protein
- Length
- 251 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Hypothetical protein TTHA0303
- UniProt
- Q5SLJ0
- Pockets
- 1 · best druggability 0.66
Structure
x-ray diffraction · 2 distinct chains · 69% helix, 5% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Hypothetical protein TTHA0303 | protein | 126 | 71% helix, 5% strand | Q5SLJ0 |
| B | Hypothetical protein TTHA0303 | protein | 125 | 67% helix, 5% strand | Q5SLJ0 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 747 | 0.66 | 0.74 | 75 | empty |
Interfaces
1 interface between chains.
- A–B · 313 Ų buried · 8 hydrogen bonds · protein-protein
Compared structures
- 2YQY · Crystal structure of TT2238, a four-helix bundle protein · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5SLJ0
- Elsewhere: RCSB PDB 2YQY · PDBe 2YQY · UniProt Q5SLJ0
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