Research workbench
Crystal structure of an outer surface protein BBA66 from borrelia burgdorferi
Analyse Crystal structure of an outer surface protein BBA66 from borrelia burgdorferi in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2YN7
- Type
- protein
- Length
- 428 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Outer surface protein
- UniProt
- O50955
- Pockets
- 3 · best druggability 0.55
Structure
x-ray diffraction · 1 distinct chain · 75% helix, 1% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Outer surface protein | protein | 214 | 75% helix, 1% strand | O50955 |
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 226 | 0.55 | 0.78 | 31 | empty |
| 2 | 268 | 0.55 | 0.77 | 38 | empty |
| 3 | 113 | 0.38 | 0.75 | 27 | empty |
Interfaces
1 interface between chains.
- A–B · 827 Ų buried · 16 hydrogen bonds · protein-protein
Compared structures
- 2YN7 · Crystal structure of an outer surface protein BBA66 from Borrelia burgdorferi · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O50955
- Elsewhere: RCSB PDB 2YN7 · PDBe 2YN7 · UniProt O50955
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