Research workbench
Huf protein - paralogue of the TAU55 histidine phosphatase domain
Analyse Huf protein - paralogue of the TAU55 histidine phosphatase domain in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2YN2
- Type
- protein
- Length
- 254 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Uncharacterized protein YNL108C
- UniProt
- P53929
- Pockets
- 1 · best druggability 0.47
Structure
x-ray diffraction · 1 distinct chain · 35% helix, 13% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Uncharacterized protein YNL108C | protein | 254 | 35% helix, 13% strand | P53929 |
Ligands and binding sites
- FMT · Formic acid · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 90 | 0.47 | 0.81 | 19 | empty |
Compared structures
- 2YN2 · Huf protein - paralogue of the tau55 histidine phosphatase domain · the same entry in another collection · chain A against A, TM-score 1.00
- P53929 · AlphaFold monomer V2.0 prediction for uncharacterized protein YNL108C (P53929) · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P53929
- Elsewhere: RCSB PDB 2YN2 · PDBe 2YN2 · UniProt P53929
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