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Human alphab crystallin acd R120G

Analyse Human alphab crystallin acd R120G in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 2Y1Z
Type: protein
Length: 172 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Alpha-crystallin B chain
UniProt: P02511

Structure

x-ray diffraction · 2 distinct chains · 7% helix, 59% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Alpha-crystallin B chain	protein	85	7% helix, 56% strand	P02511
B	Alpha-crystallin B chain	protein	87	7% helix, 61% strand	P02511

Ligands and binding sites

MRD · (4R)-2-methylpentane-2,4-diol · additive · 3 copies · chains A, B
MPD · (4S)-2-methyl-2,4-pentanediol · additive · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Interfaces

1 interface between chains.

A–B · 1031 Å² buried · 19 hydrogen bonds · protein-protein

Compared structures

2Y1Z · Human alphaB Crystallin ACD R120G · the same entry in another collection · chain A against A, TM-score 1.00
P02511 · AlphaFold monomer V2.0 prediction for alpha-crystallin B chain (P02511) · a predicted model of the same protein · chain A against A, TM-score 0.90

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P02511
Elsewhere: RCSB PDB 2Y1Z · PDBe 2Y1Z · UniProt P02511

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