Research workbench
Crystal structure of a proton dependent oligopeptide (pot) family transporter.
Analyse Crystal structure of a proton dependent oligopeptide (pot) family transporter. in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2XUT
- Type
- protein
- Length
- 1,368 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- PROTON/PEPTIDE symporter family protein
- UniProt
- Q8EKT7
- Pockets
- 20 · best druggability 0.80
Structure
x-ray diffraction · 1 distinct chain · 68% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C | PROTON/PEPTIDE symporter family protein | protein | 456 | 68% helix, 0% strand | Q8EKT7 |
Pockets
20 pockets found on a 1 Å grid, 12 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 943 | 0.80 | 0.81 | 76 | empty |
| 2 | 893 | 0.80 | 0.82 | 72 | empty |
| 3 | 942 | 0.79 | 0.81 | 73 | empty |
| 4 | 511 | 0.70 | 0.79 | 56 | empty |
| 5 | 494 | 0.69 | 0.79 | 54 | empty |
Compared structures
- 2XUT · Crystal structure of a proton dependent oligopeptide (POT) family transporter. · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8EKT7
- Elsewhere: RCSB PDB 2XUT · PDBe 2XUT · UniProt Q8EKT7
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