Research workbench

Ileal lipid binding protein in complex with glycocholate

Analyse Ileal lipid binding protein in complex with glycocholate in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1EIO
Type: protein
Length: 127 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Ileal lipid binding protein
UniProt: P10289
Ligands: GCH
Pockets: 1 · best druggability 0.82

Structure

solution nmr · 1 distinct chain · 9% helix, 58% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Ileal lipid binding protein	protein	127	9% helix, 58% strand	P10289

Ligands and binding sites

GCH · Glycocholic acid · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	509	0.82	0.88	49	GCH

Compared structures

1EIO · Ileal lipid binding protein in complex with glycocholate · the same entry in another collection · chain A against A, TM-score 1.00
P10289 · AlphaFold monomer V2.0 prediction for gastrotropin (P10289) · a predicted model of the same protein · chain A against A, TM-score 0.87

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P10289
Elsewhere: RCSB PDB 1EIO · PDBe 1EIO · UniProt P10289

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.