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Structure and metal-loading of a soluble periplasm cupro-protein: cu- cuca-open

Analyse Structure and metal-loading of a soluble periplasm cupro-protein: cu- cuca-open in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
2XLG
Type
protein
Length
229 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
SLL1785 protein
UniProt
P73600
Ligands
CU, NA
Pockets
1 · best druggability 0.52

Structure

x-ray diffraction · 1 distinct chain · 14% helix, 35% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ASLL1785 proteinprotein22914% helix, 35% strandP73600

Ligands and binding sites

  • CU · Copper (II) ion · metal · chains A
  • NA · Sodium ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
11020.520.8226empty

Modifications

Observed in the structure: 1 disulfide (disulfide).

Compared structures

  • 2XLG · Structure and metal-loading of a soluble periplasm cupro-protein: Cu- CucA-open · the same entry in another collection · chain A against A, TM-score 1.00

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