GL1X · GenesisL1 explorer

Research workbench

High resolution structure of mtsl-tagged CYLR2.

Analyse High resolution structure of mtsl-tagged CYLR2. in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
2XIU
Type
protein
Length
131 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
CYLR2
UniProt
Q8VL32
Ligands
MTN

Structure

x-ray diffraction · 2 distinct chains · 58% helix, 9% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ACYLR2protein6658% helix, 9% strandQ8VL32
BCYLR2protein6558% helix, 9% strandQ8VL32

Ligands and binding sites

  • MTN · S-[(1-oxyl-2,2,5,5-tetramethyl-2,5-dihydro-1H-pyrrol-3-yl)methyl] methanesulfonothioate · ligand · 2 copies · chains A, B
  • GOL · Glycerol · additive · chains B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Interfaces

1 interface between chains.

  • A–B · 856 Ų buried · 3 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 2 covalent (covalent ligand).

Compared structures

  • 2XIU · High resolution structure of MTSL-tagged CylR2. · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.