Research workbench
Crystal structure of monomeric mipz
Analyse Crystal structure of monomeric mipz in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2XIT
- Type
- protein
- Length
- 554 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Mipz
- UniProt
- B8GY04
- Pockets
- 9 · best druggability 0.58
Structure
x-ray diffraction · 2 distinct chains · 49% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Mipz | protein | 276 | 49% helix, 14% strand | B8GY04 |
| B | Mipz | protein | 278 | 49% helix, 16% strand | B8GY04 |
Pockets
9 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 101 | 0.58 | 0.86 | 20 | empty |
| 2 | 143 | 0.56 | 0.82 | 25 | empty |
| 3 | 130 | 0.48 | 0.78 | 32 | empty |
| 4 | 128 | 0.47 | 0.78 | 30 | empty |
| 5 | 188 | 0.46 | 0.75 | 38 | empty |
Interfaces
1 interface between chains.
- A–B · 653 Ų buried · 8 hydrogen bonds · protein-protein
Compared structures
- 2XIT · Crystal structure of monomeric MipZ · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B8GY04
- Elsewhere: RCSB PDB 2XIT · PDBe 2XIT · UniProt B8GY04
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