Research workbench
Structure of the pilus backbone (rrgb) from streptococcus pneumoniae
Analyse Structure of the pilus backbone (rrgb) from streptococcus pneumoniae in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2X9Z
- Type
- protein
- Length
- 262 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Cell wall surface anchor family protein
- UniProt
- Q97SC2
- Pockets
- 4 · best druggability 0.48
Structure
x-ray diffraction · 1 distinct chain · 4% helix, 45% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Cell wall surface anchor family protein | protein | 262 | 4% helix, 45% strand | Q97SC2 |
Pockets
4 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 78 | 0.48 | 0.83 | 23 | empty |
| 2 | 73 | 0.32 | 0.74 | 17 | empty |
| 3 | 57 | 0.31 | 0.76 | 12 | empty |
| 4 | 64 | 0.28 | 0.74 | 19 | empty |
Modifications
Observed in the structure: 1 modified (engineered).
Compared structures
- 2X9Z · Structure of the pilus backbone (rrgb) from streptococcus pneumoniae · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q97SC2
- Elsewhere: RCSB PDB 2X9Z · PDBe 2X9Z · UniProt Q97SC2
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