Research workbench
Crystal structure of mouse angiotensinogen in the oxidised form with space group P6122
Analyse Crystal structure of mouse angiotensinogen in the oxidised form with space… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2WY0
- Type
- protein
- Length
- 424 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Angiotensinogen
- UniProt
- P11859
- Ligands
- NA
- Pockets
- 4 · best druggability 0.46
Structure
x-ray diffraction · 1 distinct chain · 30% helix, 31% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| C | Angiotensinogen | protein | 424 | 30% helix, 31% strand | P11859 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
4 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 106 | 0.46 | 0.79 | 24 | empty |
| 2 | 118 | 0.39 | 0.75 | 21 | NA |
| 3 | 115 | 0.39 | 0.75 | 20 | empty |
| 4 | 91 | 0.32 | 0.73 | 27 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Compared structures
- 2WY0 · Crystal structure of mouse angiotensinogen in the oxidised form with space group P6122 · the same entry in another collection · chain C against C, TM-score 1.00
- P11859 · AlphaFold monomer V2.0 prediction for angiotensinogen (P11859) · a predicted model of the same protein · chain C against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P11859
- Elsewhere: RCSB PDB 2WY0 · PDBe 2WY0 · UniProt P11859
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