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Aurora-a inhibitor structure (2ND crystal form)

Analyse Aurora-a inhibitor structure (2ND crystal form) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
2WTW
Type
protein
Length
256 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
SERINE/THREONINE-protein kinase 6 AURORA/IPL1- related kinase 1, breast tumor-amplified…
EC
2.7.11.1
UniProt
O14965
Ligands
ZZL
Pockets
2 · best druggability 0.73

Structure

x-ray diffraction · 1 distinct chain · 36% helix, 20% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ASERINE/THREONINE-protein kinase 6 AURORA/IPL1- related kinase 1, breast tumor-amplified kinase, aurora-a, aurora-related kinase 1, HARK1 (EC 2.7.11.1)protein25636% helix, 20% strandO14965

Ligands and binding sites

  • ZZL · 4-{[9-chloro-7-(2,6-difluorophenyl)-5H-pyrimido[5,4-d][2]benzazepin-2-yl]amino}benzoic acid · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
16100.730.8058ZZL
2500.260.7314empty

Compared structures

  • 2WTW · Aurora-A Inhibitor Structure (2nd crystal form) · the same entry in another collection · chain A against A, TM-score 1.00
  • O14965 · AlphaFold monomer V2.0 prediction for aurora kinase a (O14965) · a predicted model of the same protein · chain A against A, TM-score 0.98

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