Research workbench
Salmonella enterica sada 479-519 fused to GCN4 adaptors (SADAK3, in- register fusion)
Analyse Salmonella enterica sada 479-519 fused to GCN4 adaptors (SADAK3, in- register… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2WPQ
- Type
- protein
- Length
- 297 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Trimeric autotransporter adhesin fragment
- UniProt
- Q8ZL64
- Ligands
- NO3, CL
Structure
x-ray diffraction · 1 distinct chain · 98% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C | Trimeric autotransporter adhesin fragment | protein | 99 | 98% helix, 0% strand | Q8ZL64 |
Ligands and binding sites
- NO3 · Nitrate ion · ion · 2 copies · chains A, B, C
- CL · Chloride ion · ion · 2 copies · chains A, B, C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
3 interfaces between chains.
- B–C · 1992 Ų buried · 17 hydrogen bonds · protein-protein
- A–C · 1913 Ų buried · 17 hydrogen bonds · protein-protein
- A–B · 1899 Ų buried · 16 hydrogen bonds · protein-protein
Compared structures
- 2WPQ · Salmonella enterica SadA 479-519 fused to GCN4 adaptors (SadAK3, in- register fusion) · the same entry in another collection · chain A against A, TM-score 1.00
- Q8ZL64 · AlphaFold monomer V2.0 prediction for autotransporter adhesin sada (Q8ZL64) · a predicted model of the same protein · chain A against A, TM-score 0.60
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8ZL64
- Elsewhere: RCSB PDB 2WPQ · PDBe 2WPQ · UniProt Q8ZL64
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.