Research workbench
Structural basis of N-end rule substrate recognition in escherichia COLI by the clpap adaptor protein clps - the phe peptide structure
Analyse Structural basis of N-end rule substrate recognition in escherichia COLI by the… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2WA8
- Type
- protein
- Length
- 207 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- ATP-dependent clp protease adapter protein clps; N-end rule peptide
- UniProt
- P0A8Q6
Structure
x-ray diffraction · 4 distinct chains · 44% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | ATP-dependent clp protease adapter protein clps | protein | 88 | 49% helix, 25% strand | P0A8Q6 |
| B | N-end rule peptide | protein | 10 | 0% helix, 10% strand | — |
| C | ATP-dependent clp protease adapter protein clps | protein | 103 | 47% helix, 21% strand | P0A8Q6 |
| D | N-end rule peptide | protein | 6 | 0% helix, 17% strand | — |
Interfaces
2 interfaces between chains.
- A–B · 522 Ų buried · 5 hydrogen bonds · protein-protein
- C–D · 351 Ų buried · 5 hydrogen bonds · protein-protein
Compared structures
- 2WA8 · Structural basis of N-end rule substrate recognition in Escherichia coli by the ClpAP… · the same entry in another collection · chain A against A, TM-score 1.00
- P0A8Q6 · AlphaFold monomer V2.0 prediction for ATP-dependent clp protease adapter protein clps… · a predicted model of the same protein · chain A against A, TM-score 0.96
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0A8Q6
- Elsewhere: RCSB PDB 2WA8 · PDBe 2WA8 · UniProt P0A8Q6
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.