Research workbench
Structure of pseudomonas aeruginosa lola
Analyse Structure of pseudomonas aeruginosa lola in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2W7Q
- Type
- protein
- Length
- 372 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Outer-membrane lipoprotein carrier protein
- UniProt
- Q9I0M4
- Pockets
- 3 · best druggability 0.54
Structure
x-ray diffraction · 2 distinct chains · 16% helix, 49% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Outer-membrane lipoprotein carrier protein | protein | 192 | 16% helix, 47% strand | Q9I0M4 |
| B | Outer-membrane lipoprotein carrier protein | protein | 180 | 16% helix, 51% strand | Q9I0M4 |
Ligands and binding sites
- GOL · Glycerol · additive · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 219 | 0.54 | 0.78 | 30 | empty |
| 2 | 137 | 0.43 | 0.76 | 26 | empty |
| 3 | 118 | 0.42 | 0.76 | 28 | GOL |
Interfaces
1 interface between chains.
- A–B · 887 Ų buried · 10 hydrogen bonds · protein-protein
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9I0M4
- Elsewhere: RCSB PDB 2W7Q · PDBe 2W7Q · UniProt Q9I0M4
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