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Structural insight into the interaction between archaeal escrt-III and aaa-ATPase

Analyse Structural insight into the interaction between archaeal escrt-III and… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 2W2U
Type: protein
Length: 171 residues
Chains: 4
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Hypothetical P60 katanin; Conserved archaeal protein
UniProt: Q877H3, Q4J924

Structure

x-ray diffraction · 3 distinct chains · 78% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Hypothetical P60 katanin	protein	75	83% helix, 0% strand	Q877H3
B	Hypothetical P60 katanin	protein	74	85% helix, 0% strand	Q877H3
C, D	Conserved archaeal protein	protein	11	0% helix, 0% strand	Q4J924

Interfaces

3 interfaces between chains.

B–D · 676 Å² buried · 9 hydrogen bonds · protein-protein
A–C · 674 Å² buried · 7 hydrogen bonds · protein-protein
A–B · 534 Å² buried · 7 hydrogen bonds · protein-protein

Compared structures

2W2U · Structural insight into the interaction between archaeal escrt-III and aaa-ATPase · the same entry in another collection · chain B against B, TM-score 1.00
Q4J924 · AlphaFold monomer V2.0 prediction for cell division protein B (Q4J924) · a predicted model of the same protein · chain D against A, TM-score 0.32

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q877H3
Every structure of UniProt Q4J924
Elsewhere: RCSB PDB 2W2U · PDBe 2W2U · UniProt Q877H3 · UniProt Q4J924

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