Research workbench
Crystal structure of the cytoplasmic domain of SPA40, the specificity switch for the shigella flexneri type III secretion system
Analyse Crystal structure of the cytoplasmic domain of SPA40, the specificity switch… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2VT1
- Type
- protein
- Length
- 102 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Surface presentation of antigens protein spas
- UniProt
- P0A1M8
Structure
x-ray diffraction · 2 distinct chains · 43% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Surface presentation of antigens protein spas | protein | 21 | 38% helix, 19% strand | P0A1M8 |
| B | Surface presentation of antigens protein spas | protein | 81 | 44% helix, 22% strand | P0A1M8 |
Interfaces
1 interface between chains.
- A–B · 1138 Ų buried · 18 hydrogen bonds · protein-protein
Compared structures
- 2VT1 · Crystal structure of the cytoplasmic domain of Spa40, the specificity switch for the… · the same entry in another collection · chain A against A, TM-score 1.00
- P0A1M8 · AlphaFold monomer V2.0 prediction for surface presentation of antigens protein spas… · a predicted model of the same protein · chain B against A, TM-score 0.92
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0A1M8
- Elsewhere: RCSB PDB 2VT1 · PDBe 2VT1 · UniProt P0A1M8
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