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The structure of vaccinia virus A41
Analyse The structure of vaccinia virus A41 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2VGA
- Type
- protein
- Length
- 194 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Protein A41
- UniProt
- P24766
- Pockets
- 2 · best druggability 0.41
Structure
x-ray diffraction · 1 distinct chain · 7% helix, 46% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein A41 | protein | 194 | 7% helix, 46% strand | P24766 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 83 | 0.41 | 0.78 | 24 | empty |
| 2 | 95 | 0.39 | 0.76 | 19 | empty |
Modifications
Observed in the structure: 4 disulfide (disulfide).
Compared structures
- 2VGA · The structure of Vaccinia virus A41 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P24766
- Elsewhere: RCSB PDB 2VGA · PDBe 2VGA · UniProt P24766
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