Research workbench
Solution structure of the fkbp-domain of legionella pneumophila mip in complex with rapamycin
Analyse Solution structure of the fkbp-domain of legionella pneumophila mip in complex… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2VCD
- Type
- protein
- Length
- 137 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Outer membrane protein mip
- EC
- 5.2.1.8
- UniProt
- Q5ZXE0
- Ligands
- RAP
Structure
solution nmr · 1 distinct chain · 23% helix, 31% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Outer membrane protein mip (EC 5.2.1.8) | protein | 137 | 23% helix, 31% strand | Q5ZXE0 |
Ligands and binding sites
- RAP · Rapamycin immunosuppressant drug · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 2VCD · Solution structure of the FKBP-domain of Legionella pneumophila Mip in complex with… · the same entry in another collection · chain A against A, TM-score 1.00
- Q5ZXE0 · AlphaFold monomer V2.0 prediction for outer membrane protein mip (Q5ZXE0) · a predicted model of the same protein · chain A against A, TM-score 0.91
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5ZXE0
- Elsewhere: RCSB PDB 2VCD · PDBe 2VCD · UniProt Q5ZXE0
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