Research workbench
Mouse profilin iia in complex with the proline-rich domain of vasp
Analyse Mouse profilin iia in complex with the proline-rich domain of vasp in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2V8C
- Type
- protein
- Length
- 152 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Profilin-2; Vasodilator-stimulated phosphoprotein
- UniProt
- Q3V171, P70460
- Ligands
- NA, SO4
Structure
x-ray diffraction · 2 distinct chains · 28% helix, 29% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Profilin-2 | protein | 139 | 31% helix, 32% strand | Q3V171 |
| C | Vasodilator-stimulated phosphoprotein | protein | 13 | 0% helix, 0% strand | P70460 |
Ligands and binding sites
- NA · Sodium ion · metal · chains A
- SO4 · Sulfate ion · ion · 3 copies · chains A
- IPA · Isopropyl alcohol · additive · 2 copies · chains A
- GOL · Glycerol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–C · 531 Ų buried · 7 hydrogen bonds · protein-protein
Compared structures
- 2V8C · Mouse Profilin IIa in complex with the proline-rich domain of VASP · the same entry in another collection · chain A against A, TM-score 1.00
- P70460 · AlphaFold monomer V2.0 prediction for vasodilator-stimulated phosphoprotein (P70460) · a predicted model of the same protein · chain C against A, TM-score 0.35
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q3V171
- Every structure of UniProt P70460
- Elsewhere: RCSB PDB 2V8C · PDBe 2V8C · UniProt Q3V171 · UniProt P70460
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