Research workbench
Kokobera virus helicase: mutant MET47THR
Analyse Kokobera virus helicase: mutant MET47THR in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2V6J
- Type
- protein
- Length
- 421 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- RNA helicase
- UniProt
- Q32ZD5
- Pockets
- 3 · best druggability 0.80
Structure
x-ray diffraction · 1 distinct chain · 34% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RNA helicase | protein | 421 | 34% helix, 19% strand | Q32ZD5 |
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1083 | 0.80 | 0.82 | 85 | empty |
| 2 | 149 | 0.59 | 0.84 | 24 | empty |
| 3 | 70 | 0.36 | 0.78 | 19 | empty |
Compared structures
- 2V6J · Kokobera Virus Helicase: Mutant Met47Thr · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q32ZD5
- Elsewhere: RCSB PDB 2V6J · PDBe 2V6J · UniProt Q32ZD5
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