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Crystal structure of a family 6 carbohydrate-binding module from clostridium cellulolyticum in complex with xylose

Analyse Crystal structure of a family 6 carbohydrate-binding module from clostridium… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
2V4V
Type
protein
Length
129 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
GH59 galactosidase
UniProt
Q0PRN1
Ligands
XYP, NA

Structure

x-ray diffraction · 1 distinct chain · 2% helix, 60% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AGH59 galactosidaseprotein1292% helix, 60% strandQ0PRN1

Ligands and binding sites

  • XYP · beta-D-xylopyranose · sugar · chains A
  • NA · Sodium ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 2V4V · Crystal Structure of a Family 6 Carbohydrate-Binding Module from Clostridium… · the same entry in another collection · chain A against A, TM-score 1.00

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