Research workbench
An investigation of the structure of the pseudoknot within the gene 32 messenger RNA of bacteriophage T2 using heteronuclear NMR methods
Analyse An investigation of the structure of the pseudoknot within the gene 32… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2TPK
- Type
- RNA
- Length
- 36 nucleotides
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- RNA (mRNA pseudoknot)
- Pockets
- 1 · best druggability 0.57
Structure
solution nmr · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RNA (mRNA pseudoknot) | rna | 36 | — | — |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 365 | 0.57 | 0.76 | 22 | empty |
Compared structures
- 2TPK · An investigation of the structure of the pseudoknot within the gene 32 messenger RNA of… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 2TPK · PDBe 2TPK
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