Research workbench
Solution structure of RNA-binding domain 3 of CUGBP1 in complex with RNA (UG)3
Analyse Solution structure of RNA-binding domain 3 of CUGBP1 in complex with RNA (UG)3 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2RQC
- Type
- protein + RNA
- Length
- 121 residues
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Cug-bp- and etr-3-like factor 1; 5'-R(*UP*GP*UP*GP*UP*G)-3'
- UniProt
- Q92879
Structure
solution nmr · 2 distinct chains · 19% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Cug-bp- and etr-3-like factor 1 | protein | 115 | 19% helix, 27% strand | Q92879 |
| B | 5'-R(*UP*GP*UP*GP*UP*G)-3' | rna | 6 | — | — |
Interfaces
1 interface between chains.
- A–B · 892 Ų buried · 22 hydrogen bonds · protein-nucleic
Compared structures
- 2RQC · Solution Structure of RNA-binding domain 3 of CUGBP1 in complex with RNA (UG)3 · the same entry in another collection · chain A against A, TM-score 1.00
- Q92879 · AlphaFold monomer V2.0 prediction for cugbp elav-like family member 1 (Q92879) · a predicted model of the same protein · chain A against A, TM-score 0.76
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q92879
- Elsewhere: RCSB PDB 2RQC · PDBe 2RQC · UniProt Q92879
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.