Research workbench
Solution structure of the at-rich interaction domain (arid) of JUMONJI/JARID2
Analyse Solution structure of the at-rich interaction domain (arid) of JUMONJI/JARID2 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2RQ5
- Type
- protein
- Length
- 121 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Protein jumonji
- UniProt
- Q62315
- Pockets
- 1 · best druggability 0.51
Structure
solution nmr · 1 distinct chain · 58% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein jumonji | protein | 121 | 58% helix, 3% strand | Q62315 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 58 | 0.51 | 0.86 | 16 | empty |
Compared structures
- 2RQ5 · Solution structure of the AT-rich interaction domain (ARID) of Jumonji/JARID2 · the same entry in another collection · chain A against A, TM-score 1.00
- Q62315 · AlphaFold monomer V2.0 prediction for protein jumonji (Q62315) · a predicted model of the same protein · chain A against A, TM-score 0.74
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q62315
- Elsewhere: RCSB PDB 2RQ5 · PDBe 2RQ5 · UniProt Q62315
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