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Solution structure of the lsm domain of dm EDC3 (enhancer of decapping 3)

Analyse Solution structure of the lsm domain of dm EDC3 (enhancer of decapping 3) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 2RM4
Type: protein
Length: 103 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: CG6311-pb
UniProt: Q9VVI2
Pockets: 1 · best druggability 0.43

Structure

solution nmr · 1 distinct chain · 3% helix, 38% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	CG6311-pb	protein	103	3% helix, 38% strand	Q9VVI2

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	78	0.43	0.80	21	empty

Compared structures

2RM4 · Solution Structure of the LSM Domain of Dm EDC3 (Enhancer of DECAPPING 3) · the same entry in another collection · chain A against A, TM-score 1.00
Q9VVI2 · AlphaFold monomer V2.0 prediction for enhancer of mRNA-decapping protein 3 (Q9VVI2) · a predicted model of the same protein · chain A against A, TM-score 0.66

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9VVI2
Elsewhere: RCSB PDB 2RM4 · PDBe 2RM4 · UniProt Q9VVI2

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