Research workbench

COLICIN N

Analyse COLICIN N in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1A87
Type: protein
Length: 297 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Colicin N
UniProt: P08083
Pockets: 3 · best druggability 0.66

Structure

x-ray diffraction · 1 distinct chain · 61% helix, 12% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Colicin N	protein	297	61% helix, 12% strand	P08083

Pockets

3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	329	0.66	0.81	34	empty
2	155	0.42	0.74	23	empty
3	52	0.42	0.82	18	empty

Compared structures

1A87 · COLICIN N · the same entry in another collection · chain A against A, TM-score 1.00
P08083 · AlphaFold monomer V2.0 prediction for colicin-N (P08083) · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P08083
Elsewhere: RCSB PDB 1A87 · PDBe 1A87 · UniProt P08083

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.